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1

Crystal Structure of the Parasporin-2 Bacillus thuringiensis Toxin That Recognizes Cancer Cells

Toshihiko Akiba, Yuichi Abe, Sakae Kitada, Yoshitomo Kusaka, Akio Ito, Tokio Ichimatsu, Hideki Katayama, Tetsuyuki Akao, Kazuhiko Higuchi, Eiichi Mizuki, Michio Ohba, Ryuta Kanai, Kazuaki Harata

Journal:

Journal of Molecular Biology

Year:

2009

Language:

english

File:

PDF, 1.63 MB

english, 2009

2

Full-matrix least-squares refinement of lysozymes and analysis of anisotropic thermal motion

Kazuaki Harata, Yutaka Abe, Michiro Muraki

Journal:

Proteins: Structure, Function, and Bioinformatics

Year:

1998

Language:

english

File:

PDF, 336 KB

english, 1998

3

Crystal structure of asparagine 233-replaced cyclodextrin glucanotransferase from alkalophilic Bacillus sp. 1011 determined at 1.9 Å resolution

Noriyuki Ishii, Keiko Haga, Kunio Yamane, Kazuaki Harata

Journal:

Journal of Molecular Recognition

Year:

2000

Language:

english

File:

PDF, 199 KB

english, 2000

4

Amyloid fibril formation by the CAD domain of caspase-activated DNase

Koichi Uegaki, Tsutomu Nakamura, Hitoshi Yamamoto, Atsuko Kobayashi, Takayuki Odahara, Kazuaki Harata, Yoshihisa Hagihara, Norikazu Ueyama, Toshio Yamazaki, Noboru Yumoto

Journal:

Year:

2005

Language:

english

File:

PDF, 290 KB

english, 2005

5

General parameterization of a reaction field theory combined with the boundary element method

Takao Furuki, Akihiro Umeda, Minoru Sakurai, Yoshio Inoue, Riichirô Chûjô, Kazuaki Harata

Journal:

Journal of Computational Chemistry

Year:

1994

Language:

english

File:

PDF, 1.07 MB

english, 1994

6

X-ray structural analysis of the ligand-recognition mechanism in the dual-affinity labeling of c-type lysozyme with 2′,3′-epoxypropyl β-glycoside of N-acetyllactosamine

Michiro Muraki, Kazuaki Harata

Journal:

Journal of Molecular Recognition

Year:

2003

Language:

english

File:

PDF, 397 KB

english, 2003

7

Prominent inclusion effect of dimethyl-β-cyclodextrin on photoisomerization of the thromboxane synthetase inhibitor (E)-4-(1-imidazoylmethyl)cinnamic acid

Fumitoshi Hirayama, Tadanobu Utsuki, Kaneto Uekama, Masaki Yamasaki, Kazuaki Harata

Journal:

Journal of Pharmaceutical Sciences

Year:

1992

Language:

english

File:

PDF, 649 KB

english, 1992

8

Crystal structure of the inclusion complex of hexakis-(2,6-di-O-methyl)cyclomaltohexaose with 3-iodopropionic acid

Journal:

Carbohydrate Research

Year:

1989

Language:

english

File:

PDF, 570 KB

english, 1989

9

Crystal structure of 2-O-[(S)-2-hydroxypropyl]cyclomaltoheptaose

Kazuaki Harata, C.Trinadha Rao, Josef Pitha, Kazuhiro Fukunaga, Kaneto Uekama

Journal:

Carbohydrate Research

Year:

1991

Language:

english

File:

PDF, 568 KB

english, 1991

10

Synthesis of some 2-O-(2-hydroxyalkyl) and 2-O-(2,3-dihydroxyalkyl) derivatives of cyclomaltoheptaose

Bengt Lindberg, Johan Lindberg, Josef Pitha, C.Trinadha Rao, Kazuaki Harata

Journal:

Carbohydrate Research

Year:

1991

Language:

english

File:

PDF, 398 KB

english, 1991

11

Crystal structure of 6-O-[(R)-2-hydroxypropyl]cyclomaltoheptaose and 6-O-[(S)-2-hydroxypropyl]cyclomaltoheptaose

Kazuaki Harata, C. Trinadha Rao, Josef Pitha

Journal:

Carbohydrate Research

Year:

1993

Language:

english

File:

PDF, 1.06 MB

english, 1993

12

Regioselectivity of alkylation of cyclomaltoheptaose (β-cyclodextrin) and synthesis of its mono-2-O-methyl, -ethyl, -allyl, and -propyl derivatives

Jindrich Jindrich, Josef Pitha, Bengt Lindberg, Pia Seffers, Kazuaki Harata

Journal:

Carbohydrate Research

Year:

1995

Language:

english

File:

PDF, 342 KB

english, 1995

13

Crystal structures of methyl 6-O-n-alkanoyl-β-d-glucopyranosides

Yutaka Abe, Kazuaki Harata, Masami Fujiwara, Kazuo Ohbu

Journal:

Carbohydrate Research

Year:

1995

Language:

english

File:

PDF, 397 KB

english, 1995

14

Crystal structures of methyl 6-O-acyl-α-d-galactopyranosides

Yutaka Abe, Masami Fujiwara, Kazuo Ohbu, Kazuaki Harata

Journal:

Carbohydrate Research

Year:

1995

Language:

english

File:

PDF, 355 KB

english, 1995

15

Crystal structures of heptakis(2,6-di-O-ethyl)cyclomaltoheptaose [heptakis(2,6-di-O-ethyl)-β-cyclodextrin]. Solvent-regulated helical assembly of macrocycles

Kazuaki Harata, Humitoshi Hirayama, Kaneto Uekama

Journal:

Carbohydrate Research

Year:

2000

Language:

english

File:

PDF, 450 KB

english, 2000

16

Crystal structure of the cyclohexaamylose-p-iodophenol complex

Journal:

Carbohydrate Research

Year:

1976

Language:

english

File:

PDF, 378 KB

english, 1976

17

Crystal structure of the cyclomaltohexaose (α-cyclodextrin) complex with isosorbide dinitrate. Guest-modulated channel-type structure

Kazuaki Harata, Kenji Kawano

Journal:

Carbohydrate Research

Year:

2002

Language:

english

File:

PDF, 680 KB

english, 2002

18

Crystallographic analysis of the thermal motion of the inclusion complex of cyclomaltoheptaose (β-cyclodextrin) with hexamethylenetetramine

Journal:

Carbohydrate Research

Year:

2003

Language:

english

File:

PDF, 2.07 MB

english, 2003

19

Synthesis of 21,31-O-(propane-1,2-diyl)- and 21,31-O-(3-hydroxypropane-1,2-diyl)-cyclomaltoheptaose

Jindrich Jindrich, Kazuaki Harata, Bengt Lindberg, Josep Pitha, Pia Seffers

Journal:

Carbohydrate Research

Year:

1997

Language:

english

File:

PDF, 248 KB

english, 1997

20

Regioselective sulfonation of a secondary hydroxyl group of cyclodextrins

Teiichi Murakami, Kazuaki Harata, Satoshi Morimoto

Journal:

Tetrahedron Letters

Year:

1987

Language:

english

File:

PDF, 248 KB

english, 1987

21

Fe(III)–azido complex with tetragonally compressed octahedral FeN6 geometry: synthesis, spectroscopic and X-ray single crystal analysis of [Fe(cyclam)(N3)2](ClO4)

Subratanath Koner, Seiichiro Iijima, Fumio Mizutani, Kazuaki Harata, Masanobu Watanabe, Akira Nagasawa, Masaru Sato

Journal:

Year:

1999

Language:

english

File:

PDF, 84 KB

english, 1999

22

X-ray structure of glu 53 human lysozyme

Kazuaki Harata, Michiro Muraki, Yasuhiro Hayashi, Yoshifumi Jigami

Journal:

Protein Science

Year:

1992

Language:

english

File:

PDF, 619 KB

english, 1992

23

Importance of van der Waals contact between Glu 35 and Trp 109 to the catalytic action of human lysozyme

Michiro Muraki, Shuichiro Goda, Hitoshi Nagahora, Kazuaki Harata

Journal:

Protein Science

Year:

1997

Language:

english

File:

PDF, 327 KB

english, 1997

24

Crystallographic dissection of the thermal motion of protein-sugar complex

Kazuaki Harata, Ryuta Kanai

Journal:

Proteins: Structure, Function, and Bioinformatics

Year:

2002

Language:

english

File:

PDF, 523 KB

english, 2002

25

X-ray structure of a membrane-bound β-glycosidase from the hyperthermophilic archaeon Pyrococcus horikoshii

Toshihiko Akiba, Miho Nishio, Ikuo Matsui, Kazuaki Harata

Journal:

Proteins: Structure, Function, and Bioinformatics

Year:

2004

Language:

english

File:

PDF, 848 KB

english, 2004

26

Nontoxic crystal protein from Bacillus thuringiensis demonstrates a remarkable structural similarity to β-pore-forming toxins

Toshihiko Akiba, Kazuhiko Higuchi, Eiichi Mizuki, Keisuke Ekino, Takashi Shin, Michio Ohba, Ryuta Kanai, Kazuaki Harata

Journal:

Proteins: Structure, Function, and Bioinformatics

Year:

2006

Language:

english

File:

PDF, 475 KB

english, 2006

27

Complex formation of hexakis(2,6-di-O-methyl)-α-cyclodextrin with substituted benzenes in aqueous solution

Journal:

Journal of Inclusion Phenomena and Macrocyclic Chemistry

Year:

1992

Language:

english

File:

PDF, 439 KB

english, 1992

28

The novel function of a short region K253XRXXXD259conserved in the exonuclease domain of hyperthermostable DNA polymerase I fromPyrococcus horikoshii

Rong Zheng, Eriko Matsui, Yulong Shen, Krishnasastry V. Musti, Yan Feng, Sophie Darnis, Yutaka Kawarabayasi, Hisasi Kikuchi, Kazuaki Harata, Ikuo Matsui

Journal:

Year:

2001

Language:

english

File:

PDF, 320 KB

english, 2001

29

A semi-empirical methodology applicable to the accurate calculation of hydration enthalpy of organic molecules

Takao Furuki, Minoru Sakurai, Yoshio Inoue, Riichirô Chûjô, Kazuaki Harata

Journal:

Chemical Physics Letters

Year:

1992

Language:

english

File:

PDF, 309 KB

english, 1992

30

Induced circular dichroism of cycloamylose complexes with meta- and para-disubstituted benzenes

Journal:

Bioorganic Chemistry

Year:

1981

Language:

english

File:

PDF, 560 KB

english, 1981

31

Effect of the sugar moiety on complex formation of cycloamyloses with p-nitrophenyl glycosides

Journal:

Bioorganic Chemistry

Year:

1980

Language:

english

File:

PDF, 599 KB

english, 1980

32

Implication for buried polar contacts and ion pairs in hyperthermostable enzymes

Ikuo Matsui, Kazuaki Harata

Journal:

Year:

2007

Language:

english

File:

PDF, 665 KB

english, 2007

33

Structure of α-cyclodextrin-p-iodoaniline complex

HARATA, KAZUAKI, UEDAIRA, HISASHI

Journal:

Year:

1975

File:

PDF, 378 KB

1975

34

The importance of precise positioning of negatively charged car☐ylate in the catalytic action of human lysozyme

Michiro Muraki, Kazuaki Harata, Yasuhiro Hayashi, Masayuki Machida, Yoshifumi Jigami

Journal:

Biochimica et Biophysica Acta (BBA) - Protein Structure and Molecular Enzymology

Year:

1991

Language:

english

File:

PDF, 4.88 MB

english, 1991

35

Site-Directed Mutagenesis and Sugar-Binding Properties of the Wheat Germ Agglutinin Mutants Tyr73Phe and Phe116Tyr

Hitoshi Nagahora, Kazuaki Harata, Michiro Muraki, Yoshifumi Jigami

Journal:

Year:

1995

Language:

english

File:

PDF, 993 KB

english, 1995

36

Role of Arg115 in the Catalytic Action of Human Lysozyme: X-ray Structure of His115 and Glu115 Mutants

Kazuaki Harata, Michiro Muraki, Yoshifumi Jigami

Journal:

Journal of Molecular Biology

Year:

1993

File:

PDF, 607 KB

1993

37

Crystallization and Preliminary X-ray Studies of Cylodextrin Glucanotransferase from Alkalophilic Bacillus sp. 1011

Keiko Haga, Kazuaki Harata, Akira Nakamura, Kunio Yamane

Journal:

Journal of Molecular Biology

Year:

1994

File:

PDF, 118 KB

1994

38

Crystallographic evaluation of internal motion of human α-lactalbumin refined by full-matrix least-squares method

Kazuaki Harata, Yutaka Abe, Michiro Muraki

Journal:

Journal of Molecular Biology

Year:

1999

Language:

english

File:

PDF, 296 KB

english, 1999

39

Crystal structures of Urtica dioica agglutinin and its complex with tri-N-acetylchitotriose

Kazuaki Harata, Michiro Muraki

Journal:

Journal of Molecular Biology

Year:

2000

Language:

english

File:

PDF, 561 KB

english, 2000

40

Alteration of the substrate specificity of human lysozyme by site-specific intermolecular cross-linking

Michiro Muraki, Yoshifumi Jigami, Kazuaki Harata

Journal:

Year:

1994

Language:

english

File:

PDF, 838 KB

english, 1994

41

Molecular Structure of a Novel Membrane Protease Specific for a Stomatin Homolog from the Hyperthermophilic Archaeon Pyrococcus horikoshii

Hideshi Yokoyama, Eriko Matsui, Toshihiko Akiba, Kazuaki Harata, Ikuo Matsui

Journal:

Journal of Molecular Biology

Year:

2006

Language:

english

File:

PDF, 1.12 MB

english, 2006

42

Interactions of wheat-germ agglutinin with GlcNAcβ1,6Gal sequence

Michiro Muraki, Miyuki Ishimura, Kazuaki Harata

Journal:

Biochimica et Biophysica Acta (BBA) - General Subjects

Year:

2002

Language:

english

File:

PDF, 594 KB

english, 2002

43

Crystallization and Preliminary X-ray Studies of V1-ATPase of Thermus thermophilus HB8 Complexed with Mg-ADP

Noriyuki Ishii, Shinya Saijo, Takao Sato, Nobuo Tanaka, Kazuaki Harata

Journal:

Journal of Structural Biology

Year:

2001

Language:

english

File:

PDF, 98 KB

english, 2001

44

Effect of Peracylation of β-Cyclodextrin on the Molecular Structure and on the Formation of Inclusion Complexes: An X-ray Study

Añibarro, Maribel, Gessler, Katrin, Usón, Isabel, Sheldrick, George M., Harata, Kazuaki, Uekama, Kaneto, Hirayama, Fumitoshi, Abe, Yutaka, Saenger, Wolfram

Journal:

Journal of the American Chemical Society

Year:

2001

Language:

english

File:

PDF, 300 KB

english, 2001

45

Role of Phe283 in enzymatic reaction of cyclodextrin glycosyltransferase from alkalophilic Bacillus sp.1011: Substrate binding and arrangement of the catalytic site

Ryuta Kanai, Keiko Haga, Toshihiko Akiba, Kunio Yamane, Kazuaki Harata

Journal:

Protein Science

Year:

2004

Language:

english

File:

PDF, 674 KB

english, 2004

46

Role of Trp140 at subsite −6 on the maltohexaose production of maltohexaose-producing amylase from alkalophilic Bacillus sp.707

Ryuta Kanai, Keiko Haga, Toshihiko Akiba, Kunio Yamane, Kazuaki Harata

Journal:

Protein Science

Year:

2006

Language:

english

File:

PDF, 938 KB

english, 2006

47

Dissection of the functional role of structural elements of tyrosine-63 in the catalytic action of human lysozyme

Muraki, Michiro, Harata, Kazuaki, Jigami, Yoshifumi

Journal:

Year:

1992

Language:

english

File:

PDF, 922 KB

english, 1992

48

Protein−Carbohydrate Interactions in Human Lysozyme Probed by Combining Site-Directed Mutagenesis and Affinity Labeling †

Muraki, Michiro, Harata, Kazuaki, Sugita, Naoki, Sato, Ken-ichi

Journal:

Year:

2000

Language:

english

File:

PDF, 312 KB

english, 2000

49

Molecular Arrangement and Intermolecular Hydrogen Bonding in Crystals of Methyl 6- O -Acyl- d -glycopyranosides

Abe, Yutaka, Harata, Kazuaki, Fujiwara, Masami, Ohbu, Kazuo

Journal:

Year:

1996

Language:

english

File:

PDF, 177 KB

english, 1996

50

Dual Affinity Labeling of the Active Site of Human Lysozyme with an N -Acetyllactosamine Derivative: First Ligand Assisted Recognition of the Second Ligand †,‡

Muraki, Michiro, Harata, Kazuaki, Sugita, Naoki, Sato, Ken-ichi

Journal:

Year:

1999

Language:

english

File:

PDF, 182 KB

english, 1999

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